extendr_api/robj/into_robj.rs
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use super::*;
use crate::scalar::Scalar;
use crate::single_threaded;
mod repeat_into_robj;
/// Returns an `CHARSXP` based on the provided `&str`.
///
/// Note that R does string interning, thus repeated application of this
/// function on the same string, will incur little computational cost.
///
/// Note, that you must protect the return value somehow.
pub(crate) fn str_to_character(s: &str) -> SEXP {
unsafe {
if s.is_na() {
R_NaString
} else if s.is_empty() {
R_BlankString
} else {
single_threaded(|| {
// this function embeds a terminating \nul
Rf_mkCharLenCE(s.as_ptr().cast(), s.len() as i32, cetype_t::CE_UTF8)
})
}
}
}
/// Convert a null to an Robj.
impl From<()> for Robj {
fn from(_: ()) -> Self {
// Note: we do not need to protect this.
unsafe { Robj::from_sexp(R_NilValue) }
}
}
/// Convert a [`Result`] to an [`Robj`].
///
/// Panics if there is an error.
///
/// To use the `?`-operator, an extendr-function must return either [`extendr_api::error::Result`] or [`std::result::Result`].
/// Use of `panic!` in extendr is discouraged due to memory leakage.
///
/// Alternative behaviors enabled by feature toggles:
/// extendr-api supports different conversions from [`Result<T,E>`] into `Robj`.
/// Below, `x_ok` represents an R variable on R side which was returned from rust via `T::into_robj()` or similar.
/// Likewise, `x_err` was returned to R side from rust via `E::into_robj()` or similar.
/// extendr-api
/// * `result_list`: `Ok(T)` is encoded as `list(ok = x_ok, err = NULL)` and `Err` as `list(ok = NULL, err = e_err)`.
/// * `result_condition'`: `Ok(T)` is encoded as `x_ok` and `Err(E)` as `condition(msg="extendr_error", value = x_err, class=c("extendr_error", "error", "condition"))`
/// * More than one enabled feature: Only one feature gate will take effect, the current order of precedence is [`result_list`, `result_condition`, ... ].
/// * Neither of the above (default): `Ok(T)` is encoded as `x_ok`and `Err(E)` will trigger `throw_r_error()`, which is discouraged.
/// ```
/// use extendr_api::prelude::*;
/// fn my_func() -> Result<f64> {
/// Ok(1.0)
/// }
///
/// test! {
/// assert_eq!(r!(my_func()), r!(1.0));
/// }
/// ```
///
/// [`extendr_api::error::Result`]: crate::error::Result
#[cfg(not(any(feature = "result_list", feature = "result_condition")))]
impl<T, E> From<std::result::Result<T, E>> for Robj
where
T: Into<Robj>,
E: std::fmt::Debug,
{
fn from(res: std::result::Result<T, E>) -> Self {
res.unwrap().into()
}
}
/// Convert a [`Result`] to an [`Robj`]. Return either `Ok` value or `Err` value wrapped in an
/// error condition. This allows using `?` operator in functions
/// and returning [`Result<T>`] without panicking on `Err`. `T` must implement [`IntoRobj`].
///
/// Returns `Ok` value as is. Returns `Err` wrapped in an R error condition. The `Err` is placed in
/// $value field of the condition, and its message is set to 'extendr_err'
#[cfg(all(feature = "result_condition", not(feature = "result_list")))]
impl<T, E> From<std::result::Result<T, E>> for Robj
where
T: Into<Robj>,
E: Into<Robj>,
{
fn from(res: std::result::Result<T, E>) -> Self {
use crate as extendr_api;
match res {
Ok(x) => x.into(),
Err(x) => {
let mut err = list!(message = "extendr_err", value = x.into());
err.set_class(["extendr_error", "error", "condition"])
.expect("internal error: failed to set class");
err.into()
}
}
}
}
/// Convert a `Result` to an R `List` with an `ok` and `err` elements.
/// This allows using `?` operator in functions
/// and returning [`std::result::Result`] or [`extendr_api::error::Result`]
/// without panicking on `Err`.
///
/// [`extendr_api::error::Result`]: crate::error::Result
#[cfg(feature = "result_list")]
impl<T, E> From<std::result::Result<T, E>> for Robj
where
T: Into<Robj>,
E: Into<Robj>,
{
fn from(res: std::result::Result<T, E>) -> Self {
use crate as extendr_api;
let mut result = match res {
Ok(x) => list!(ok = x.into(), err = NULL),
Err(x) => {
let err_robj = x.into();
if err_robj.is_null() {
panic!("Internal error: result_list not allowed to return NULL as err-value")
}
list!(ok = NULL, err = err_robj)
}
};
result
.set_class(&["extendr_result"])
.expect("Internal error: failed to set class");
result.into()
}
}
// string conversions from Error trait to Robj and String
impl From<Error> for Robj {
fn from(res: Error) -> Self {
res.to_string().into()
}
}
impl From<Error> for String {
fn from(res: Error) -> Self {
res.to_string()
}
}
/// Convert an Robj reference into a borrowed Robj.
impl From<&Robj> for Robj {
// Note: we should probably have a much better reference
// mechanism as double-free or underprotection is a distinct possibility.
fn from(val: &Robj) -> Self {
unsafe { Robj::from_sexp(val.get()) }
}
}
/// This is an extension trait to provide a convenience method `into_robj()`.
///
/// Defer to `From<T> for Robj`-impls if you have custom types.
///
pub trait IntoRobj {
fn into_robj(self) -> Robj;
}
impl<T> IntoRobj for T
where
Robj: From<T>,
{
fn into_robj(self) -> Robj {
self.into()
}
}
/// `ToVectorValue` is a trait that allows many different types
/// to be converted to vectors. It is used as a type parameter
/// to `collect_robj()`.
pub trait ToVectorValue {
fn sexptype() -> SEXPTYPE {
SEXPTYPE::NILSXP
}
fn to_real(&self) -> f64
where
Self: Sized,
{
0.
}
fn to_complex(&self) -> Rcomplex
where
Self: Sized,
{
Rcomplex { r: 0., i: 0. }
}
fn to_integer(&self) -> i32
where
Self: Sized,
{
std::i32::MIN
}
fn to_logical(&self) -> i32
where
Self: Sized,
{
std::i32::MIN
}
fn to_raw(&self) -> u8
where
Self: Sized,
{
0
}
fn to_sexp(&self) -> SEXP
where
Self: Sized,
{
unsafe { R_NilValue }
}
}
macro_rules! impl_real_tvv {
($t: ty) => {
impl ToVectorValue for $t {
fn sexptype() -> SEXPTYPE {
SEXPTYPE::REALSXP
}
fn to_real(&self) -> f64 {
*self as f64
}
}
impl ToVectorValue for &$t {
fn sexptype() -> SEXPTYPE {
SEXPTYPE::REALSXP
}
fn to_real(&self) -> f64 {
**self as f64
}
}
impl ToVectorValue for Option<$t> {
fn sexptype() -> SEXPTYPE {
SEXPTYPE::REALSXP
}
fn to_real(&self) -> f64 {
if self.is_some() {
self.unwrap() as f64
} else {
unsafe { R_NaReal }
}
}
}
};
}
impl_real_tvv!(f64);
impl_real_tvv!(f32);
// Since these types might exceeds the max or min of R's 32bit integer, we need
// to return as REALSXP
impl_real_tvv!(i64);
impl_real_tvv!(u32);
impl_real_tvv!(u64);
impl_real_tvv!(usize);
macro_rules! impl_complex_tvv {
($t: ty) => {
impl ToVectorValue for $t {
fn sexptype() -> SEXPTYPE {
SEXPTYPE::CPLXSXP
}
fn to_complex(&self) -> Rcomplex {
unsafe { std::mem::transmute(*self) }
}
}
impl ToVectorValue for &$t {
fn sexptype() -> SEXPTYPE {
SEXPTYPE::CPLXSXP
}
fn to_complex(&self) -> Rcomplex {
unsafe { std::mem::transmute(**self) }
}
}
};
}
impl_complex_tvv!(c64);
impl_complex_tvv!(Rcplx);
impl_complex_tvv!((f64, f64));
macro_rules! impl_integer_tvv {
($t: ty) => {
impl ToVectorValue for $t {
fn sexptype() -> SEXPTYPE {
SEXPTYPE::INTSXP
}
fn to_integer(&self) -> i32 {
*self as i32
}
}
impl ToVectorValue for &$t {
fn sexptype() -> SEXPTYPE {
SEXPTYPE::INTSXP
}
fn to_integer(&self) -> i32 {
**self as i32
}
}
impl ToVectorValue for Option<$t> {
fn sexptype() -> SEXPTYPE {
SEXPTYPE::INTSXP
}
fn to_integer(&self) -> i32 {
if self.is_some() {
self.unwrap() as i32
} else {
unsafe { R_NaInt }
}
}
}
};
}
impl_integer_tvv!(i8);
impl_integer_tvv!(i16);
impl_integer_tvv!(i32);
impl_integer_tvv!(u16);
impl ToVectorValue for u8 {
fn sexptype() -> SEXPTYPE {
SEXPTYPE::RAWSXP
}
fn to_raw(&self) -> u8 {
*self
}
}
impl ToVectorValue for &u8 {
fn sexptype() -> SEXPTYPE {
SEXPTYPE::RAWSXP
}
fn to_raw(&self) -> u8 {
**self
}
}
macro_rules! impl_str_tvv {
($t: ty) => {
impl ToVectorValue for $t {
fn sexptype() -> SEXPTYPE {
SEXPTYPE::STRSXP
}
fn to_sexp(&self) -> SEXP
where
Self: Sized,
{
str_to_character(self.as_ref())
}
}
impl ToVectorValue for &$t {
fn sexptype() -> SEXPTYPE {
SEXPTYPE::STRSXP
}
fn to_sexp(&self) -> SEXP
where
Self: Sized,
{
str_to_character(self.as_ref())
}
}
impl ToVectorValue for Option<$t> {
fn sexptype() -> SEXPTYPE {
SEXPTYPE::STRSXP
}
fn to_sexp(&self) -> SEXP
where
Self: Sized,
{
if let Some(s) = self {
str_to_character(s.as_ref())
} else {
unsafe { R_NaString }
}
}
}
};
}
impl_str_tvv! {&str}
impl_str_tvv! {String}
impl ToVectorValue for bool {
fn sexptype() -> SEXPTYPE {
SEXPTYPE::LGLSXP
}
fn to_logical(&self) -> i32
where
Self: Sized,
{
*self as i32
}
}
impl ToVectorValue for &bool {
fn sexptype() -> SEXPTYPE {
SEXPTYPE::LGLSXP
}
fn to_logical(&self) -> i32
where
Self: Sized,
{
**self as i32
}
}
impl ToVectorValue for Rbool {
fn sexptype() -> SEXPTYPE {
SEXPTYPE::LGLSXP
}
fn to_logical(&self) -> i32
where
Self: Sized,
{
self.inner()
}
}
impl ToVectorValue for &Rbool {
fn sexptype() -> SEXPTYPE {
SEXPTYPE::LGLSXP
}
fn to_logical(&self) -> i32
where
Self: Sized,
{
self.inner()
}
}
impl ToVectorValue for Option<bool> {
fn sexptype() -> SEXPTYPE {
SEXPTYPE::LGLSXP
}
fn to_logical(&self) -> i32 {
if self.is_some() {
self.unwrap() as i32
} else {
unsafe { R_NaInt }
}
}
}
// Not thread safe.
fn fixed_size_collect<I>(iter: I, len: usize) -> Robj
where
I: Iterator,
I: Sized,
I::Item: ToVectorValue,
{
single_threaded(|| unsafe {
// Length of the vector is known in advance.
let sexptype = I::Item::sexptype();
if sexptype != SEXPTYPE::NILSXP {
let res = Robj::alloc_vector(sexptype, len);
let sexp = res.get();
match sexptype {
SEXPTYPE::REALSXP => {
let ptr = REAL(sexp);
for (i, v) in iter.enumerate() {
*ptr.add(i) = v.to_real();
}
}
SEXPTYPE::CPLXSXP => {
let ptr = COMPLEX(sexp);
for (i, v) in iter.enumerate() {
*ptr.add(i) = v.to_complex();
}
}
SEXPTYPE::INTSXP => {
let ptr = INTEGER(sexp);
for (i, v) in iter.enumerate() {
*ptr.add(i) = v.to_integer();
}
}
SEXPTYPE::LGLSXP => {
let ptr = LOGICAL(sexp);
for (i, v) in iter.enumerate() {
*ptr.add(i) = v.to_logical();
}
}
SEXPTYPE::STRSXP => {
for (i, v) in iter.enumerate() {
SET_STRING_ELT(sexp, i as isize, v.to_sexp());
}
}
SEXPTYPE::RAWSXP => {
let ptr = RAW(sexp);
for (i, v) in iter.enumerate() {
*ptr.add(i) = v.to_raw();
}
}
_ => {
panic!("unexpected SEXPTYPE in collect_robj");
}
}
res
} else {
Robj::from(())
}
})
}
/// Extensions to iterators for R objects including [RobjItertools::collect_robj()].
pub trait RobjItertools: Iterator {
/// Convert a wide range of iterators to Robj.
/// ```
/// use extendr_api::prelude::*;
///
/// test! {
/// // Integer iterators.
/// let robj = (0..3).collect_robj();
/// assert_eq!(robj.as_integer_vector().unwrap(), vec![0, 1, 2]);
///
/// // Logical iterators.
/// let robj = (0..3).map(|x| x % 2 == 0).collect_robj();
/// assert_eq!(robj.as_logical_vector().unwrap(), vec![TRUE, FALSE, TRUE]);
///
/// // Numeric iterators.
/// let robj = (0..3).map(|x| x as f64).collect_robj();
/// assert_eq!(robj.as_real_vector().unwrap(), vec![0., 1., 2.]);
///
/// // String iterators.
/// let robj = (0..3).map(|x| format!("{}", x)).collect_robj();
/// assert_eq!(robj.as_str_vector(), Some(vec!["0", "1", "2"]));
/// }
/// ```
fn collect_robj(self) -> Robj
where
Self: Iterator,
Self: Sized,
Self::Item: ToVectorValue,
{
if let (len, Some(max)) = self.size_hint() {
if len == max {
return fixed_size_collect(self, len);
}
}
// If the size is indeterminate, create a vector and call recursively.
let vec: Vec<_> = self.collect();
assert!(vec.iter().size_hint() == (vec.len(), Some(vec.len())));
vec.into_iter().collect_robj()
}
/// Collects an iterable into an [`RArray`].
/// The iterable must yield items column by column (aka Fortan order)
///
/// # Arguments
///
/// * `dims` - an array containing the length of each dimension
fn collect_rarray<const LEN: usize>(
self,
dims: [usize; LEN],
) -> Result<RArray<Self::Item, [usize; LEN]>>
where
Self: Iterator,
Self: Sized,
Self::Item: ToVectorValue,
Robj: for<'a> AsTypedSlice<'a, Self::Item>,
{
let mut vector = self.collect_robj();
let prod = dims.iter().product::<usize>();
if prod != vector.len() {
return Err(Error::Other(format!(
"The vector length ({}) does not match the length implied by the dimensions ({})",
vector.len(),
prod
)));
}
vector.set_attrib(wrapper::symbol::dim_symbol(), dims.iter().collect_robj())?;
let _data = vector.as_typed_slice().ok_or(Error::Other(
"Unknown error in converting to slice".to_string(),
))?;
Ok(RArray::from_parts(vector, dims))
}
}
// Thanks to *pretzelhammer* on stackoverflow for this.
impl<T> RobjItertools for T where T: Iterator {}
// Scalars which are ToVectorValue
impl<T> From<T> for Robj
where
T: ToVectorValue,
{
fn from(scalar: T) -> Self {
Some(scalar).into_iter().collect_robj()
}
}
macro_rules! impl_from_as_iterator {
($t: ty) => {
impl<T> From<$t> for Robj
where
$t: RobjItertools,
<$t as Iterator>::Item: ToVectorValue,
T: ToVectorValue,
{
fn from(val: $t) -> Self {
val.collect_robj()
}
}
};
}
// impl<T> From<Range<T>> for Robj
// where
// Range<T> : RobjItertools,
// <Range<T> as Iterator>::Item: ToVectorValue,
// T : ToVectorValue
// {
// fn from(val: Range<T>) -> Self {
// val.collect_robj()
// }
// } //
impl<'a, T, const N: usize> From<[T; N]> for Robj
where
Self: 'a,
T: ToVectorValue,
{
fn from(val: [T; N]) -> Self {
fixed_size_collect(val.into_iter(), N)
}
}
impl<'a, T, const N: usize> From<&'a [T; N]> for Robj
where
Self: 'a,
&'a T: ToVectorValue + 'a,
{
fn from(val: &'a [T; N]) -> Self {
fixed_size_collect(val.iter(), N)
}
}
impl<'a, T, const N: usize> From<&'a mut [T; N]> for Robj
where
Self: 'a,
&'a mut T: ToVectorValue + 'a,
{
fn from(val: &'a mut [T; N]) -> Self {
fixed_size_collect(val.iter_mut(), N)
}
}
impl<T: ToVectorValue + Clone> From<&Vec<T>> for Robj {
fn from(value: &Vec<T>) -> Self {
let len = value.len();
fixed_size_collect(value.iter().cloned(), len)
}
}
impl<T: ToVectorValue> From<Vec<T>> for Robj {
fn from(value: Vec<T>) -> Self {
let len = value.len();
fixed_size_collect(value.into_iter(), len)
}
}
impl<'a, T> From<&'a [T]> for Robj
where
Self: 'a,
T: 'a,
&'a T: ToVectorValue,
{
fn from(val: &'a [T]) -> Self {
val.iter().collect_robj()
}
}
impl_from_as_iterator! {Range<T>}
impl_from_as_iterator! {RangeInclusive<T>}
impl From<Vec<Robj>> for Robj {
/// Convert a vector of Robj into a list.
fn from(val: Vec<Robj>) -> Self {
List::from_values(val.iter()).into()
}
}
impl From<Vec<Rstr>> for Robj {
/// Convert a vector of Rstr into strings.
fn from(val: Vec<Rstr>) -> Self {
Strings::from_values(val).into()
}
}
#[cfg(test)]
mod test {
use super::*;
use crate as extendr_api;
#[test]
fn test_vec_rint_to_robj() {
test! {
let int_vec = vec![3,4,0,-2];
let int_vec_robj: Robj = int_vec.clone().into();
// unsafe { libR_sys::Rf_PrintValue(int_vec_robj.get())}
assert_eq!(int_vec_robj.as_integer_slice().unwrap(), &int_vec);
let rint_vec = vec![Rint::new(3), Rint::new(4), Rint::new(0), Rint::new(-2)];
let rint_vec_robj: Robj = rint_vec.into();
// unsafe { libR_sys::Rf_PrintValue(rint_vec_robj.get())}
assert_eq!(rint_vec_robj.as_integer_slice().unwrap(), &int_vec);
}
}
#[test]
fn test_collect_rarray_matrix() {
test! {
// Check that collect_rarray works the same as R's matrix() function
let rmat = (1i32..=16).collect_rarray([4, 4]);
assert!(rmat.is_ok());
assert_eq!(Robj::from(rmat), R!("matrix(1:16, nrow=4)").unwrap());
}
}
#[test]
fn test_collect_rarray_tensor() {
test! {
// Check that collect_rarray works the same as R's array() function
let rmat = (1i32..=16).collect_rarray([2, 4, 2]);
assert!(rmat.is_ok());
assert_eq!(Robj::from(rmat), R!("array(1:16, dim=c(2, 4, 2))").unwrap());
}
}
#[test]
fn test_collect_rarray_matrix_failure() {
test! {
// Check that collect_rarray fails when given an invalid shape
let rmat = (1i32..=16).collect_rarray([3, 3]);
assert!(rmat.is_err());
let msg = rmat.unwrap_err().to_string();
assert!(msg.contains('9'));
assert!(msg.contains("dimension"));
}
}
#[test]
fn test_collect_tensor_failure() {
test! {
// Check that collect_rarray fails when given an invalid shape
let rmat = (1i32..=16).collect_rarray([3, 3, 3]);
assert!(rmat.is_err());
let msg = rmat.unwrap_err().to_string();
assert!(msg.contains("27"));
assert!(msg.contains("dimension"));
}
}
#[test]
#[cfg(all(feature = "result_condition", not(feature = "result_list")))]
fn test_result_condition() {
use crate::prelude::*;
fn my_err_f() -> std::result::Result<f64, f64> {
Err(42.0) // return err float
}
test! {
assert_eq!(
r!(my_err_f()),
R!(
"structure(list(message = 'extendr_err',
value = 42.0), class = c('extendr_error', 'error', 'condition'))"
).unwrap()
);
}
}
#[test]
#[cfg(feature = "result_list")]
fn test_result_list() {
use crate::prelude::*;
fn my_err_f() -> std::result::Result<f64, String> {
Err("We have water in the engine room!".to_string())
}
fn my_ok_f() -> std::result::Result<f64, String> {
Ok(123.123)
}
test! {
assert_eq!(
r!(my_err_f()),
R!("x=list(ok=NULL, err='We have water in the engine room!')
class(x)='extendr_result'
x"
).unwrap()
);
assert_eq!(
r!(my_ok_f()),
R!("x = list(ok=123.123, err=NULL)
class(x)='extendr_result'
x"
).unwrap()
);
}
}
}